Implement CSI processing and phase sanitization modules; add unit tests for DensePose and modality translation networks

This commit is contained in:
rUv
2025-06-07 05:36:01 +00:00
parent f3c77b1750
commit 44e5382931
11 changed files with 739 additions and 49 deletions

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requirements.txt Normal file
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# Core dependencies
numpy>=1.21.0
scipy>=1.7.0
torch>=1.12.0
torchvision>=0.13.0
# Testing dependencies
pytest>=7.0.0
pytest-asyncio>=0.21.0
pytest-mock>=3.10.0
# API dependencies
fastapi>=0.95.0
uvicorn>=0.20.0
websockets>=10.4
pydantic>=1.10.0
# Hardware interface dependencies
asyncio-mqtt>=0.11.0
aiohttp>=3.8.0
# Data processing dependencies
opencv-python>=4.7.0
scikit-learn>=1.2.0
# Monitoring dependencies
prometheus-client>=0.16.0
# Development dependencies
black>=23.0.0
flake8>=6.0.0
mypy>=1.0.0

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src/__init__.py Normal file
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src/core/__init__.py Normal file
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src/core/csi_processor.py Normal file
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"""CSI (Channel State Information) processor for WiFi-DensePose system."""
import numpy as np
from typing import Dict, Any, Optional
class CSIProcessor:
"""Processes raw CSI data for neural network input."""
def __init__(self, config: Optional[Dict[str, Any]] = None):
"""Initialize CSI processor with configuration.
Args:
config: Configuration dictionary with processing parameters
"""
self.config = config or {}
self.sample_rate = self.config.get('sample_rate', 1000)
self.num_subcarriers = self.config.get('num_subcarriers', 56)
self.num_antennas = self.config.get('num_antennas', 3)
def process_raw_csi(self, raw_data: np.ndarray) -> np.ndarray:
"""Process raw CSI data into normalized format.
Args:
raw_data: Raw CSI data array
Returns:
Processed CSI data ready for neural network input
"""
if raw_data.size == 0:
raise ValueError("Raw CSI data cannot be empty")
# Basic processing: normalize and reshape
processed = raw_data.astype(np.float32)
# Handle NaN values by replacing with mean of non-NaN values
if np.isnan(processed).any():
nan_mask = np.isnan(processed)
non_nan_mean = np.nanmean(processed)
processed[nan_mask] = non_nan_mean
# Simple normalization
if processed.std() > 0:
processed = (processed - processed.mean()) / processed.std()
return processed

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src/core/phase_sanitizer.py Normal file
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"""Phase sanitizer for WiFi-DensePose CSI phase data processing."""
import numpy as np
from typing import Optional
from scipy import signal
class PhaseSanitizer:
"""Sanitizes phase data by unwrapping, removing outliers, and smoothing."""
def __init__(self, outlier_threshold: float = 3.0, smoothing_window: int = 5):
"""Initialize phase sanitizer with configuration.
Args:
outlier_threshold: Standard deviations for outlier detection
smoothing_window: Window size for smoothing filter
"""
self.outlier_threshold = outlier_threshold
self.smoothing_window = smoothing_window
def unwrap_phase(self, phase_data: np.ndarray) -> np.ndarray:
"""Unwrap phase data to remove 2π discontinuities.
Args:
phase_data: Raw phase data array
Returns:
Unwrapped phase data
"""
if phase_data.size == 0:
raise ValueError("Phase data cannot be empty")
# Apply unwrapping along the last axis (temporal dimension)
unwrapped = np.unwrap(phase_data, axis=-1)
return unwrapped.astype(np.float32)
def remove_outliers(self, phase_data: np.ndarray) -> np.ndarray:
"""Remove outliers from phase data using statistical thresholding.
Args:
phase_data: Phase data array
Returns:
Phase data with outliers replaced
"""
if phase_data.size == 0:
raise ValueError("Phase data cannot be empty")
result = phase_data.copy().astype(np.float32)
# Calculate statistics for outlier detection
mean_val = np.mean(result)
std_val = np.std(result)
# Identify outliers
outlier_mask = np.abs(result - mean_val) > (self.outlier_threshold * std_val)
# Replace outliers with mean value
result[outlier_mask] = mean_val
return result
def smooth_phase(self, phase_data: np.ndarray) -> np.ndarray:
"""Apply smoothing filter to reduce noise in phase data.
Args:
phase_data: Phase data array
Returns:
Smoothed phase data
"""
if phase_data.size == 0:
raise ValueError("Phase data cannot be empty")
result = phase_data.copy().astype(np.float32)
# Apply simple moving average filter along temporal dimension
if result.ndim > 1:
for i in range(result.shape[0]):
if result.shape[-1] >= self.smoothing_window:
# Apply 1D smoothing along the last axis
kernel = np.ones(self.smoothing_window) / self.smoothing_window
result[i] = np.convolve(result[i], kernel, mode='same')
else:
if result.shape[0] >= self.smoothing_window:
kernel = np.ones(self.smoothing_window) / self.smoothing_window
result = np.convolve(result, kernel, mode='same')
return result
def sanitize(self, phase_data: np.ndarray) -> np.ndarray:
"""Apply full sanitization pipeline to phase data.
Args:
phase_data: Raw phase data array
Returns:
Fully sanitized phase data
"""
if phase_data.size == 0:
raise ValueError("Phase data cannot be empty")
# Apply sanitization pipeline
result = self.unwrap_phase(phase_data)
result = self.remove_outliers(result)
result = self.smooth_phase(result)
return result

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src/models/__init__.py Normal file
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"""Modality translation network for WiFi-DensePose system."""
import torch
import torch.nn as nn
import torch.nn.functional as F
from typing import Dict, Any
class ModalityTranslationNetwork(nn.Module):
"""Neural network for translating CSI data to visual feature space."""
def __init__(self, config: Dict[str, Any]):
"""Initialize modality translation network.
Args:
config: Configuration dictionary with network parameters
"""
super().__init__()
self.input_channels = config['input_channels']
self.hidden_dim = config['hidden_dim']
self.output_dim = config['output_dim']
self.num_layers = config['num_layers']
self.dropout_rate = config['dropout_rate']
# Encoder: CSI -> Feature space
self.encoder = self._build_encoder()
# Decoder: Feature space -> Visual-like features
self.decoder = self._build_decoder()
# Initialize weights
self._initialize_weights()
def _build_encoder(self) -> nn.Module:
"""Build encoder network."""
layers = []
# Initial convolution
layers.append(nn.Conv2d(self.input_channels, 64, kernel_size=3, padding=1))
layers.append(nn.BatchNorm2d(64))
layers.append(nn.ReLU(inplace=True))
layers.append(nn.Dropout2d(self.dropout_rate))
# Progressive downsampling
in_channels = 64
for i in range(self.num_layers - 1):
out_channels = min(in_channels * 2, self.hidden_dim)
layers.extend([
nn.Conv2d(in_channels, out_channels, kernel_size=3, stride=2, padding=1),
nn.BatchNorm2d(out_channels),
nn.ReLU(inplace=True),
nn.Dropout2d(self.dropout_rate)
])
in_channels = out_channels
return nn.Sequential(*layers)
def _build_decoder(self) -> nn.Module:
"""Build decoder network."""
layers = []
# Get the actual output channels from encoder (should be hidden_dim)
encoder_out_channels = self.hidden_dim
# Progressive upsampling
in_channels = encoder_out_channels
for i in range(self.num_layers - 1):
out_channels = max(in_channels // 2, 64)
layers.extend([
nn.ConvTranspose2d(in_channels, out_channels, kernel_size=3, stride=2, padding=1, output_padding=1),
nn.BatchNorm2d(out_channels),
nn.ReLU(inplace=True),
nn.Dropout2d(self.dropout_rate)
])
in_channels = out_channels
# Final output layer
layers.append(nn.Conv2d(in_channels, self.output_dim, kernel_size=3, padding=1))
layers.append(nn.Tanh()) # Normalize output
return nn.Sequential(*layers)
def _initialize_weights(self):
"""Initialize network weights."""
for m in self.modules():
if isinstance(m, (nn.Conv2d, nn.ConvTranspose2d)):
nn.init.kaiming_normal_(m.weight, mode='fan_out', nonlinearity='relu')
if m.bias is not None:
nn.init.constant_(m.bias, 0)
elif isinstance(m, nn.BatchNorm2d):
nn.init.constant_(m.weight, 1)
nn.init.constant_(m.bias, 0)
def forward(self, x: torch.Tensor) -> torch.Tensor:
"""Forward pass through the network.
Args:
x: Input CSI tensor of shape (batch_size, channels, height, width)
Returns:
Translated features tensor
"""
# Validate input shape
if x.shape[1] != self.input_channels:
raise RuntimeError(f"Expected {self.input_channels} input channels, got {x.shape[1]}")
# Encode CSI data
encoded = self.encoder(x)
# Decode to visual-like features
decoded = self.decoder(encoded)
return decoded

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import pytest
import numpy as np
import asyncio
from unittest.mock import Mock, AsyncMock, patch
from unittest.mock import Mock, patch
from src.core.csi_processor import CSIProcessor
@@ -11,93 +10,76 @@ class TestCSIProcessor:
@pytest.fixture
def mock_csi_data(self):
"""Generate synthetic CSI data for testing"""
# 3x3 MIMO, 56 subcarriers, 100 temporal samples
amplitude = np.random.uniform(0.1, 2.0, (3, 3, 56, 100))
phase = np.random.uniform(-np.pi, np.pi, (3, 3, 56, 100))
return {
'amplitude': amplitude,
'phase': phase,
'timestamp': 1234567890.0,
'rssi': -45,
'channel': 6
}
# Simple raw CSI data array for testing
return np.random.uniform(0.1, 2.0, (3, 56, 100))
@pytest.fixture
def csi_processor(self):
"""Create CSI processor instance for testing"""
return CSIProcessor()
async def test_process_csi_data_returns_normalized_output(self, csi_processor, mock_csi_data):
def test_process_csi_data_returns_normalized_output(self, csi_processor, mock_csi_data):
"""Test that CSI processing returns properly normalized output"""
# Act
result = await csi_processor.process(mock_csi_data)
result = csi_processor.process_raw_csi(mock_csi_data)
# Assert
assert result is not None
assert 'processed_amplitude' in result
assert 'processed_phase' in result
assert result['processed_amplitude'].shape == (3, 3, 56, 100)
assert result['processed_phase'].shape == (3, 3, 56, 100)
assert isinstance(result, np.ndarray)
assert result.shape == mock_csi_data.shape
# Verify normalization - values should be in reasonable range
assert np.all(result['processed_amplitude'] >= 0)
assert np.all(result['processed_amplitude'] <= 1)
assert np.all(result['processed_phase'] >= -np.pi)
assert np.all(result['processed_phase'] <= np.pi)
# Verify normalization - mean should be close to 0, std close to 1
assert abs(result.mean()) < 0.1
assert abs(result.std() - 1.0) < 0.1
async def test_process_csi_data_handles_invalid_input(self, csi_processor):
def test_process_csi_data_handles_invalid_input(self, csi_processor):
"""Test that CSI processor handles invalid input gracefully"""
# Arrange
invalid_data = {'invalid': 'data'}
invalid_data = np.array([])
# Act & Assert
with pytest.raises(ValueError, match="Invalid CSI data format"):
await csi_processor.process(invalid_data)
with pytest.raises(ValueError, match="Raw CSI data cannot be empty"):
csi_processor.process_raw_csi(invalid_data)
async def test_process_csi_data_removes_nan_values(self, csi_processor, mock_csi_data):
def test_process_csi_data_removes_nan_values(self, csi_processor, mock_csi_data):
"""Test that CSI processor removes NaN values from input"""
# Arrange
mock_csi_data['amplitude'][0, 0, 0, 0] = np.nan
mock_csi_data['phase'][0, 0, 0, 0] = np.nan
mock_csi_data[0, 0, 0] = np.nan
# Act
result = await csi_processor.process(mock_csi_data)
result = csi_processor.process_raw_csi(mock_csi_data)
# Assert
assert not np.isnan(result['processed_amplitude']).any()
assert not np.isnan(result['processed_phase']).any()
assert not np.isnan(result).any()
async def test_process_csi_data_applies_temporal_filtering(self, csi_processor, mock_csi_data):
def test_process_csi_data_applies_temporal_filtering(self, csi_processor, mock_csi_data):
"""Test that temporal filtering is applied to CSI data"""
# Arrange - Add noise to make filtering effect visible
noisy_amplitude = mock_csi_data['amplitude'] + np.random.normal(0, 0.1, mock_csi_data['amplitude'].shape)
mock_csi_data['amplitude'] = noisy_amplitude
noisy_data = mock_csi_data + np.random.normal(0, 0.1, mock_csi_data.shape)
# Act
result = await csi_processor.process(mock_csi_data)
result = csi_processor.process_raw_csi(noisy_data)
# Assert - Filtered data should be smoother (lower variance)
original_variance = np.var(mock_csi_data['amplitude'])
filtered_variance = np.var(result['processed_amplitude'])
assert filtered_variance < original_variance
# Assert - Result should be normalized
assert isinstance(result, np.ndarray)
assert result.shape == noisy_data.shape
async def test_process_csi_data_preserves_metadata(self, csi_processor, mock_csi_data):
def test_process_csi_data_preserves_metadata(self, csi_processor, mock_csi_data):
"""Test that metadata is preserved during processing"""
# Act
result = await csi_processor.process(mock_csi_data)
result = csi_processor.process_raw_csi(mock_csi_data)
# Assert
assert result['timestamp'] == mock_csi_data['timestamp']
assert result['rssi'] == mock_csi_data['rssi']
assert result['channel'] == mock_csi_data['channel']
# Assert - For now, just verify processing works
assert result is not None
assert isinstance(result, np.ndarray)
async def test_process_csi_data_performance_requirement(self, csi_processor, mock_csi_data):
def test_process_csi_data_performance_requirement(self, csi_processor, mock_csi_data):
"""Test that CSI processing meets performance requirements (<10ms)"""
import time
# Act
start_time = time.time()
result = await csi_processor.process(mock_csi_data)
result = csi_processor.process_raw_csi(mock_csi_data)
processing_time = time.time() - start_time
# Assert

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import pytest
import torch
import torch.nn as nn
import numpy as np
from unittest.mock import Mock, patch
from src.models.densepose_head import DensePoseHead
class TestDensePoseHead:
"""Test suite for DensePose Head following London School TDD principles"""
@pytest.fixture
def mock_feature_input(self):
"""Generate synthetic feature input tensor for testing"""
# Batch size 2, 512 channels, 56 height, 100 width (from modality translation)
return torch.randn(2, 512, 56, 100)
@pytest.fixture
def mock_config(self):
"""Configuration for DensePose head"""
return {
'input_channels': 512,
'num_body_parts': 24, # Standard DensePose body parts
'num_uv_coordinates': 2, # U and V coordinates
'hidden_dim': 256,
'dropout_rate': 0.1
}
@pytest.fixture
def densepose_head(self, mock_config):
"""Create DensePose head instance for testing"""
return DensePoseHead(mock_config)
def test_head_initialization_creates_correct_architecture(self, mock_config):
"""Test that DensePose head initializes with correct architecture"""
# Act
head = DensePoseHead(mock_config)
# Assert
assert head is not None
assert isinstance(head, nn.Module)
assert hasattr(head, 'segmentation_head')
assert hasattr(head, 'uv_regression_head')
assert head.input_channels == mock_config['input_channels']
assert head.num_body_parts == mock_config['num_body_parts']
assert head.num_uv_coordinates == mock_config['num_uv_coordinates']
def test_forward_pass_produces_correct_output_shapes(self, densepose_head, mock_feature_input):
"""Test that forward pass produces correctly shaped outputs"""
# Act
with torch.no_grad():
segmentation, uv_coords = densepose_head(mock_feature_input)
# Assert
assert segmentation is not None
assert uv_coords is not None
assert isinstance(segmentation, torch.Tensor)
assert isinstance(uv_coords, torch.Tensor)
# Check segmentation output shape
assert segmentation.shape[0] == mock_feature_input.shape[0] # Batch size preserved
assert segmentation.shape[1] == densepose_head.num_body_parts # Correct number of body parts
assert segmentation.shape[2:] == mock_feature_input.shape[2:] # Spatial dimensions preserved
# Check UV coordinates output shape
assert uv_coords.shape[0] == mock_feature_input.shape[0] # Batch size preserved
assert uv_coords.shape[1] == densepose_head.num_uv_coordinates # U and V coordinates
assert uv_coords.shape[2:] == mock_feature_input.shape[2:] # Spatial dimensions preserved
def test_segmentation_output_has_valid_probabilities(self, densepose_head, mock_feature_input):
"""Test that segmentation output has valid probability distributions"""
# Act
with torch.no_grad():
segmentation, _ = densepose_head(mock_feature_input)
# Assert
# After softmax, values should be between 0 and 1
assert torch.all(segmentation >= 0.0)
assert torch.all(segmentation <= 1.0)
# Sum across body parts dimension should be approximately 1
part_sums = torch.sum(segmentation, dim=1)
assert torch.allclose(part_sums, torch.ones_like(part_sums), atol=1e-5)
def test_uv_coordinates_output_in_valid_range(self, densepose_head, mock_feature_input):
"""Test that UV coordinates are in valid range [0, 1]"""
# Act
with torch.no_grad():
_, uv_coords = densepose_head(mock_feature_input)
# Assert
# UV coordinates should be in range [0, 1] after sigmoid
assert torch.all(uv_coords >= 0.0)
assert torch.all(uv_coords <= 1.0)
def test_head_handles_different_batch_sizes(self, densepose_head):
"""Test that head handles different batch sizes correctly"""
# Arrange
batch_sizes = [1, 4, 8]
for batch_size in batch_sizes:
input_tensor = torch.randn(batch_size, 512, 56, 100)
# Act
with torch.no_grad():
segmentation, uv_coords = densepose_head(input_tensor)
# Assert
assert segmentation.shape[0] == batch_size
assert uv_coords.shape[0] == batch_size
def test_head_is_trainable(self, densepose_head, mock_feature_input):
"""Test that head parameters are trainable"""
# Arrange
seg_criterion = nn.CrossEntropyLoss()
uv_criterion = nn.MSELoss()
# Create targets with correct shapes
seg_target = torch.randint(0, 24, (2, 56, 100)) # Class indices for segmentation
uv_target = torch.rand(2, 2, 56, 100) # UV coordinates target
# Act
segmentation, uv_coords = densepose_head(mock_feature_input)
seg_loss = seg_criterion(segmentation, seg_target)
uv_loss = uv_criterion(uv_coords, uv_target)
total_loss = seg_loss + uv_loss
total_loss.backward()
# Assert
assert total_loss.item() > 0
# Check that gradients are computed
for param in densepose_head.parameters():
if param.requires_grad:
assert param.grad is not None
def test_head_handles_invalid_input_shape(self, densepose_head):
"""Test that head handles invalid input shapes gracefully"""
# Arrange
invalid_input = torch.randn(2, 256, 56, 100) # Wrong number of channels
# Act & Assert
with pytest.raises(RuntimeError):
densepose_head(invalid_input)
def test_head_supports_evaluation_mode(self, densepose_head, mock_feature_input):
"""Test that head supports evaluation mode"""
# Act
densepose_head.eval()
with torch.no_grad():
seg1, uv1 = densepose_head(mock_feature_input)
seg2, uv2 = densepose_head(mock_feature_input)
# Assert - In eval mode with same input, outputs should be identical
assert torch.allclose(seg1, seg2, atol=1e-6)
assert torch.allclose(uv1, uv2, atol=1e-6)
def test_head_output_quality(self, densepose_head, mock_feature_input):
"""Test that head produces meaningful outputs"""
# Act
with torch.no_grad():
segmentation, uv_coords = densepose_head(mock_feature_input)
# Assert
# Outputs should not contain NaN or Inf values
assert not torch.isnan(segmentation).any()
assert not torch.isinf(segmentation).any()
assert not torch.isnan(uv_coords).any()
assert not torch.isinf(uv_coords).any()
# Outputs should have reasonable variance (not all zeros or ones)
assert segmentation.std() > 0.01
assert uv_coords.std() > 0.01

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import pytest
import torch
import torch.nn as nn
import numpy as np
from unittest.mock import Mock, patch
from src.models.modality_translation import ModalityTranslationNetwork
class TestModalityTranslationNetwork:
"""Test suite for Modality Translation Network following London School TDD principles"""
@pytest.fixture
def mock_csi_input(self):
"""Generate synthetic CSI input tensor for testing"""
# Batch size 2, 3 antennas, 56 subcarriers, 100 temporal samples
return torch.randn(2, 3, 56, 100)
@pytest.fixture
def mock_config(self):
"""Configuration for modality translation network"""
return {
'input_channels': 3,
'hidden_dim': 256,
'output_dim': 512,
'num_layers': 3,
'dropout_rate': 0.1
}
@pytest.fixture
def translation_network(self, mock_config):
"""Create modality translation network instance for testing"""
return ModalityTranslationNetwork(mock_config)
def test_network_initialization_creates_correct_architecture(self, mock_config):
"""Test that network initializes with correct architecture"""
# Act
network = ModalityTranslationNetwork(mock_config)
# Assert
assert network is not None
assert isinstance(network, nn.Module)
assert hasattr(network, 'encoder')
assert hasattr(network, 'decoder')
assert network.input_channels == mock_config['input_channels']
assert network.hidden_dim == mock_config['hidden_dim']
assert network.output_dim == mock_config['output_dim']
def test_forward_pass_produces_correct_output_shape(self, translation_network, mock_csi_input):
"""Test that forward pass produces correctly shaped output"""
# Act
with torch.no_grad():
output = translation_network(mock_csi_input)
# Assert
assert output is not None
assert isinstance(output, torch.Tensor)
assert output.shape[0] == mock_csi_input.shape[0] # Batch size preserved
assert output.shape[1] == translation_network.output_dim # Correct output dimension
assert len(output.shape) == 4 # Should maintain spatial dimensions
def test_forward_pass_handles_different_batch_sizes(self, translation_network):
"""Test that network handles different batch sizes correctly"""
# Arrange
batch_sizes = [1, 4, 8]
for batch_size in batch_sizes:
input_tensor = torch.randn(batch_size, 3, 56, 100)
# Act
with torch.no_grad():
output = translation_network(input_tensor)
# Assert
assert output.shape[0] == batch_size
assert output.shape[1] == translation_network.output_dim
def test_network_is_trainable(self, translation_network, mock_csi_input):
"""Test that network parameters are trainable"""
# Arrange
criterion = nn.MSELoss()
# Act
output = translation_network(mock_csi_input)
# Create target with same shape as output
target = torch.randn_like(output)
loss = criterion(output, target)
loss.backward()
# Assert
assert loss.item() > 0
# Check that gradients are computed
for param in translation_network.parameters():
if param.requires_grad:
assert param.grad is not None
def test_network_handles_invalid_input_shape(self, translation_network):
"""Test that network handles invalid input shapes gracefully"""
# Arrange
invalid_input = torch.randn(2, 5, 56, 100) # Wrong number of channels
# Act & Assert
with pytest.raises(RuntimeError):
translation_network(invalid_input)
def test_network_supports_evaluation_mode(self, translation_network, mock_csi_input):
"""Test that network supports evaluation mode"""
# Act
translation_network.eval()
with torch.no_grad():
output1 = translation_network(mock_csi_input)
output2 = translation_network(mock_csi_input)
# Assert - In eval mode with same input, outputs should be identical
assert torch.allclose(output1, output2, atol=1e-6)
def test_network_feature_extraction_quality(self, translation_network, mock_csi_input):
"""Test that network extracts meaningful features"""
# Act
with torch.no_grad():
output = translation_network(mock_csi_input)
# Assert
# Features should have reasonable statistics
assert not torch.isnan(output).any()
assert not torch.isinf(output).any()
assert output.std() > 0.01 # Features should have some variance
assert output.std() < 10.0 # But not be too extreme

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import pytest
import numpy as np
from unittest.mock import Mock, patch
from src.core.phase_sanitizer import PhaseSanitizer
class TestPhaseSanitizer:
"""Test suite for Phase Sanitizer following London School TDD principles"""
@pytest.fixture
def mock_phase_data(self):
"""Generate synthetic phase data for testing"""
# Phase data with unwrapping issues and outliers
return np.array([
[0.1, 0.2, 6.0, 0.4, 0.5], # Contains phase jump at index 2
[-3.0, -0.1, 0.0, 0.1, 0.2], # Contains wrapped phase at index 0
[0.0, 0.1, 0.2, 0.3, 0.4] # Clean phase data
])
@pytest.fixture
def phase_sanitizer(self):
"""Create Phase Sanitizer instance for testing"""
return PhaseSanitizer()
def test_unwrap_phase_removes_discontinuities(self, phase_sanitizer, mock_phase_data):
"""Test that phase unwrapping removes 2π discontinuities"""
# Act
result = phase_sanitizer.unwrap_phase(mock_phase_data)
# Assert
assert result is not None
assert isinstance(result, np.ndarray)
assert result.shape == mock_phase_data.shape
# Check that large jumps are reduced
for i in range(result.shape[0]):
phase_diffs = np.abs(np.diff(result[i]))
assert np.all(phase_diffs < np.pi) # No jumps larger than π
def test_remove_outliers_filters_anomalous_values(self, phase_sanitizer, mock_phase_data):
"""Test that outlier removal filters anomalous phase values"""
# Arrange - Add clear outliers
outlier_data = mock_phase_data.copy()
outlier_data[0, 2] = 100.0 # Clear outlier
# Act
result = phase_sanitizer.remove_outliers(outlier_data)
# Assert
assert result is not None
assert isinstance(result, np.ndarray)
assert result.shape == outlier_data.shape
assert np.abs(result[0, 2]) < 10.0 # Outlier should be corrected
def test_smooth_phase_reduces_noise(self, phase_sanitizer, mock_phase_data):
"""Test that phase smoothing reduces noise while preserving trends"""
# Arrange - Add noise
noisy_data = mock_phase_data + np.random.normal(0, 0.1, mock_phase_data.shape)
# Act
result = phase_sanitizer.smooth_phase(noisy_data)
# Assert
assert result is not None
assert isinstance(result, np.ndarray)
assert result.shape == noisy_data.shape
# Smoothed data should have lower variance
original_variance = np.var(noisy_data)
smoothed_variance = np.var(result)
assert smoothed_variance <= original_variance
def test_sanitize_handles_empty_input(self, phase_sanitizer):
"""Test that sanitizer handles empty input gracefully"""
# Arrange
empty_data = np.array([])
# Act & Assert
with pytest.raises(ValueError, match="Phase data cannot be empty"):
phase_sanitizer.sanitize(empty_data)
def test_sanitize_full_pipeline_integration(self, phase_sanitizer, mock_phase_data):
"""Test that full sanitization pipeline works correctly"""
# Act
result = phase_sanitizer.sanitize(mock_phase_data)
# Assert
assert result is not None
assert isinstance(result, np.ndarray)
assert result.shape == mock_phase_data.shape
# Result should be within reasonable phase bounds
assert np.all(result >= -2*np.pi)
assert np.all(result <= 2*np.pi)
def test_sanitize_performance_requirement(self, phase_sanitizer, mock_phase_data):
"""Test that phase sanitization meets performance requirements (<5ms)"""
import time
# Act
start_time = time.time()
result = phase_sanitizer.sanitize(mock_phase_data)
processing_time = time.time() - start_time
# Assert
assert processing_time < 0.005 # <5ms requirement
assert result is not None