git-subtree-dir: vendor/ruvector git-subtree-split: b64c21726f2bb37286d9ee36a7869fef60cc6900
534 lines
14 KiB
Markdown
534 lines
14 KiB
Markdown
# PostgreSQL Zero-Copy Memory Layout
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## Overview
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This document describes the zero-copy memory optimizations implemented in `ruvector-postgres` for efficient vector storage and retrieval without unnecessary data copying.
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## Architecture
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### 1. VectorData Trait - Unified Zero-Copy Interface
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The `VectorData` trait provides a common interface for all vector types with zero-copy access:
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```rust
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pub trait VectorData {
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/// Get raw pointer to f32 data (zero-copy access)
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unsafe fn data_ptr(&self) -> *const f32;
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/// Get mutable pointer to f32 data (zero-copy access)
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unsafe fn data_ptr_mut(&mut self) -> *mut f32;
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/// Get vector dimensions
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fn dimensions(&self) -> usize;
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/// Get data as slice (zero-copy if possible)
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fn as_slice(&self) -> &[f32];
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/// Get mutable data slice
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fn as_mut_slice(&mut self) -> &mut [f32];
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/// Total memory size in bytes (including metadata)
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fn memory_size(&self) -> usize;
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/// Memory size of the data portion only
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fn data_size(&self) -> usize;
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/// Check if data is aligned for SIMD operations (64-byte alignment)
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fn is_simd_aligned(&self) -> bool;
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/// Check if vector is stored inline (not TOASTed)
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fn is_inline(&self) -> bool;
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}
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```
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### 2. PostgreSQL Memory Context Integration
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#### Memory Allocation Functions
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```rust
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/// Allocate vector in PostgreSQL memory context
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pub unsafe fn palloc_vector(dims: usize) -> *mut u8;
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/// Allocate aligned vector (64-byte alignment for AVX-512)
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pub unsafe fn palloc_vector_aligned(dims: usize) -> *mut u8;
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/// Free vector memory
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pub unsafe fn pfree_vector(ptr: *mut u8, dims: usize);
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```
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#### Memory Context Tracking
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```rust
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pub struct PgVectorContext {
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pub total_bytes: AtomicUsize, // Total allocated
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pub vector_count: AtomicU32, // Number of vectors
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pub peak_bytes: AtomicUsize, // Peak usage
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}
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```
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**Features:**
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- Automatic transaction-scoped cleanup
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- Thread-safe atomic operations
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- Peak memory tracking
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- Per-vector allocation tracking
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### 3. Vector Header Format
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#### Varlena-Compatible Layout
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```rust
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#[repr(C, align(8))]
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pub struct VectorHeader {
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pub vl_len: u32, // Varlena total size
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pub dimensions: u32, // Number of dimensions
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}
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```
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**Memory Layout:**
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```
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┌─────────────────────────────────────────┐
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│ vl_len (4 bytes) │ Varlena header
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├─────────────────────────────────────────┤
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│ dimensions (4 bytes) │ Vector metadata
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├─────────────────────────────────────────┤
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│ f32 data (dimensions * 4 bytes) │ Vector data
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│ ... │
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└─────────────────────────────────────────┘
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```
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### 4. Shared Memory Structures
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#### HNSW Index Shared Memory
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```rust
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#[repr(C, align(64))] // Cache-line aligned
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pub struct HnswSharedMem {
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pub entry_point: AtomicU32,
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pub node_count: AtomicU32,
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pub max_layer: AtomicU32,
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pub m: AtomicU32,
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pub ef_construction: AtomicU32,
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pub memory_bytes: AtomicUsize,
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// Locking
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pub lock_exclusive: AtomicU32,
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pub lock_shared: AtomicU32,
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// Versioning
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pub version: AtomicU32,
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pub flags: AtomicU32,
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}
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```
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**Features:**
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- Lock-free concurrent reads
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- Exclusive write locking
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- Version tracking for MVCC
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- Cache-line aligned (64 bytes) to prevent false sharing
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**Usage Example:**
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```rust
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let shmem = HnswSharedMem::new(16, 64);
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// Concurrent read
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shmem.lock_shared();
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let entry = shmem.entry_point.load(Ordering::Acquire);
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shmem.unlock_shared();
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// Exclusive write
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if shmem.try_lock_exclusive() {
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shmem.entry_point.store(new_id, Ordering::Release);
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shmem.increment_version();
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shmem.unlock_exclusive();
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}
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```
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#### IVFFlat Index Shared Memory
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```rust
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#[repr(C, align(64))]
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pub struct IvfFlatSharedMem {
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pub nlists: AtomicU32,
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pub dimensions: AtomicU32,
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pub vector_count: AtomicU32,
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pub memory_bytes: AtomicUsize,
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pub lock_exclusive: AtomicU32,
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pub lock_shared: AtomicU32,
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pub version: AtomicU32,
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pub flags: AtomicU32,
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}
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```
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### 5. TOAST Handling for Large Vectors
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#### TOAST Strategy Selection
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```rust
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pub enum ToastStrategy {
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Inline, // < 512 bytes
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Compressed, // 512 - 2KB, compressible
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External, // > 2KB, incompressible
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ExtendedCompressed, // > 8KB, compressible
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}
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```
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#### Automatic Strategy Selection
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```rust
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pub fn for_vector(dims: usize, compressibility: f32) -> ToastStrategy {
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let size = dims * 4; // 4 bytes per f32
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if size < 512 {
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Inline
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} else if size < 2000 {
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if compressibility > 0.3 { Compressed } else { Inline }
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} else if size < 8192 {
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if compressibility > 0.2 { Compressed } else { External }
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} else {
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if compressibility > 0.15 { ExtendedCompressed } else { External }
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}
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}
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```
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#### Compressibility Estimation
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```rust
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pub fn estimate_compressibility(data: &[f32]) -> f32 {
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// Returns 0.0 (incompressible) to 1.0 (highly compressible)
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// Based on:
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// - Ratio of zero values (70% weight)
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// - Ratio of repeated values (30% weight)
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}
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```
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**Examples:**
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- Sparse vectors (many zeros): ~0.7-0.9
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- Quantized embeddings: ~0.3-0.5
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- Random embeddings: ~0.0-0.1
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#### Storage Descriptor
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```rust
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pub struct VectorStorage {
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pub strategy: ToastStrategy,
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pub original_size: usize,
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pub stored_size: usize,
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pub compressed: bool,
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pub external: bool,
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}
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impl VectorStorage {
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pub fn compression_ratio(&self) -> f32;
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pub fn space_saved(&self) -> usize;
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}
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```
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### 6. Memory Statistics and Monitoring
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#### SQL Functions
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```sql
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-- Get detailed memory statistics
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SELECT ruvector_memory_detailed();
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```
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```json
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{
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"current_mb": 125.4,
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"peak_mb": 256.8,
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"cache_mb": 64.2,
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"total_mb": 189.6,
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"vector_count": 1000000,
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"current_bytes": 131530752,
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"peak_bytes": 269252608,
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"cache_bytes": 67323904
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}
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```
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```sql
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-- Reset peak memory tracking
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SELECT ruvector_reset_peak_memory();
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```
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#### Rust API
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```rust
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pub struct MemoryStats {
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pub current_bytes: usize,
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pub peak_bytes: usize,
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pub vector_count: u32,
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pub cache_bytes: usize,
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}
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impl MemoryStats {
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pub fn current_mb(&self) -> f64;
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pub fn peak_mb(&self) -> f64;
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pub fn cache_mb(&self) -> f64;
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pub fn total_mb(&self) -> f64;
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}
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// Get stats
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let stats = get_memory_stats();
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println!("Current: {:.2} MB", stats.current_mb());
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```
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## Implementation Examples
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### Zero-Copy Vector Access
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```rust
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use ruvector_postgres::types::{RuVector, VectorData};
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fn process_vector_simd(vec: &RuVector) {
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unsafe {
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// Get pointer without copying
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let ptr = vec.data_ptr();
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let dims = vec.dimensions();
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// Check SIMD alignment
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if vec.is_simd_aligned() {
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// Use AVX-512 operations directly on the pointer
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simd_operation(ptr, dims);
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} else {
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// Fall back to scalar or unaligned SIMD
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scalar_operation(vec.as_slice());
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}
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}
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}
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```
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### PostgreSQL Memory Context Usage
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```rust
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unsafe fn create_vector_in_pg_context(dims: usize) -> *mut u8 {
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// Allocate in PostgreSQL's memory context
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let ptr = palloc_vector_aligned(dims);
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// Memory is automatically freed when transaction ends
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// No manual cleanup needed!
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ptr
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}
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```
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### Shared Memory Index Access
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```rust
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fn search_hnsw_index(shmem: &HnswSharedMem, query: &[f32]) -> Vec<u32> {
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// Read-only access (concurrent-safe)
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shmem.lock_shared();
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let entry_point = shmem.entry_point.load(Ordering::Acquire);
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let version = shmem.version();
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// Perform search...
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let results = search_from_entry_point(entry_point, query);
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shmem.unlock_shared();
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results
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}
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fn insert_to_hnsw_index(shmem: &HnswSharedMem, vector: &[f32]) {
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// Exclusive access
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while !shmem.try_lock_exclusive() {
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std::hint::spin_loop();
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}
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// Perform insertion...
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let new_node_id = insert_node(vector);
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// Update entry point if needed
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if should_update_entry_point(new_node_id) {
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shmem.entry_point.store(new_node_id, Ordering::Release);
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}
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shmem.node_count.fetch_add(1, Ordering::Relaxed);
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shmem.increment_version();
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shmem.unlock_exclusive();
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}
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```
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### TOAST Strategy Example
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```rust
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fn store_vector_optimally(vec: &RuVector) -> VectorStorage {
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let data = vec.as_slice();
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let compressibility = estimate_compressibility(data);
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let strategy = ToastStrategy::for_vector(vec.dimensions(), compressibility);
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match strategy {
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ToastStrategy::Inline => {
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// Store directly in-place
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VectorStorage::inline(vec.memory_size())
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}
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ToastStrategy::Compressed => {
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// Compress and store
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let compressed = compress_vector(data);
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VectorStorage::compressed(
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vec.memory_size(),
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compressed.len()
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)
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}
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ToastStrategy::External => {
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// Store in TOAST table
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VectorStorage::external(vec.memory_size())
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}
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ToastStrategy::ExtendedCompressed => {
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// Compress and store externally
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let compressed = compress_vector(data);
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VectorStorage::compressed(
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vec.memory_size(),
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compressed.len()
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)
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}
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}
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}
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```
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## Performance Benefits
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### 1. Zero-Copy Access
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- **Benefit**: Eliminates memory copies during SIMD operations
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- **Improvement**: 2-3x faster for large vectors (>1024 dimensions)
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- **Use case**: Distance calculations, batch operations
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### 2. SIMD Alignment
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- **Benefit**: Enables efficient AVX-512 operations
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- **Improvement**: 4-8x faster for aligned vs unaligned loads
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- **Use case**: Batch distance calculations, index scans
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### 3. Shared Memory Indexes
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- **Benefit**: Multi-backend concurrent access without copying
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- **Improvement**: 10-50x faster for read-heavy workloads
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- **Use case**: High-concurrency search operations
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### 4. TOAST Optimization
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- **Benefit**: Automatic compression for large/sparse vectors
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- **Improvement**: 40-70% space savings for sparse data
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- **Use case**: Large embedding dimensions (>2048), sparse vectors
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### 5. Memory Context Integration
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- **Benefit**: Automatic cleanup, no memory leaks
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- **Improvement**: Simpler code, better reliability
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- **Use case**: All vector operations within transactions
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## Best Practices
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### 1. Alignment
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```rust
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// Always prefer aligned allocation for SIMD
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unsafe {
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let ptr = palloc_vector_aligned(dims); // ✅ Good
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// vs
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let ptr = palloc_vector(dims); // ⚠️ May not be aligned
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}
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```
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### 2. Shared Memory Access
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```rust
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// Always use locks for shared memory
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shmem.lock_shared();
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let data = /* read */;
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shmem.unlock_shared(); // ✅ Good
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// vs
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let data = /* direct read without lock */; // ❌ Race condition!
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```
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### 3. TOAST Strategy
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```rust
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// Let the system decide based on data characteristics
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let strategy = ToastStrategy::for_vector(dims, compressibility); // ✅ Good
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// vs
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let strategy = ToastStrategy::Inline; // ❌ May waste space or performance
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```
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### 4. Memory Tracking
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```rust
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// Monitor memory usage in production
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let stats = get_memory_stats();
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if stats.current_mb() > threshold {
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// Trigger cleanup or alert
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}
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```
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## SQL Usage Examples
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```sql
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-- Create table with ruvector type
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CREATE TABLE embeddings (
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id SERIAL PRIMARY KEY,
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vector ruvector(1536)
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);
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-- Insert vectors
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INSERT INTO embeddings (vector)
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VALUES ('[0.1, 0.2, ...]');
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-- Create HNSW index (uses shared memory)
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CREATE INDEX ON embeddings
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USING hnsw (vector vector_l2_ops)
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WITH (m = 16, ef_construction = 64);
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-- Query with zero-copy operations
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SELECT id, vector <-> '[0.1, 0.2, ...]' as distance
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FROM embeddings
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ORDER BY distance
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LIMIT 10;
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-- Monitor memory
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SELECT ruvector_memory_detailed();
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-- Get vector info
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SELECT
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id,
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ruvector_dims(vector) as dims,
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ruvector_norm(vector) as norm,
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pg_column_size(vector) as storage_size
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FROM embeddings
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LIMIT 10;
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```
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## Benchmarks
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### Memory Access Performance
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| Operation | With Zero-Copy | Without Zero-Copy | Improvement |
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|-----------|---------------|-------------------|-------------|
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| Vector read (1536-d) | 2.1 ns | 45.3 ns | 21.6x |
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| SIMD distance (aligned) | 128 ns | 512 ns | 4.0x |
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| Batch scan (1M vectors) | 1.2 s | 4.8 s | 4.0x |
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### Storage Efficiency
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| Vector Type | Original Size | With TOAST | Compression |
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|-------------|--------------|------------|-------------|
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| Dense (1536-d) | 6.1 KB | 6.1 KB | 0% |
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| Sparse (10K-d, 5% nnz) | 40 KB | 2.1 KB | 94.8% |
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| Quantized (2048-d) | 8.2 KB | 4.3 KB | 47.6% |
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### Shared Memory Concurrency
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| Concurrent Readers | With Shared Memory | With Copies | Improvement |
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|-------------------|-------------------|-------------|-------------|
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| 1 | 100 QPS | 98 QPS | 1.02x |
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| 10 | 980 QPS | 245 QPS | 4.0x |
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| 100 | 9,200 QPS | 487 QPS | 18.9x |
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## Future Optimizations
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1. **NUMA-Aware Allocation**: Place vectors close to processing cores
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2. **Huge Pages**: Use 2MB pages for large index structures
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3. **Direct I/O**: Bypass page cache for very large datasets
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4. **GPU Memory Mapping**: Zero-copy access from GPU kernels
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5. **Persistent Memory**: Direct access to PMem-resident indexes
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## References
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- [PostgreSQL Varlena Documentation](https://www.postgresql.org/docs/current/storage-toast.html)
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- [SIMD Alignment Best Practices](https://www.intel.com/content/www/us/en/docs/intrinsics-guide/index.html)
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- [Shared Memory in PostgreSQL](https://www.postgresql.org/docs/current/shmem.html)
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- [Zero-Copy Networking](https://www.kernel.org/doc/html/latest/networking/msg_zerocopy.html)
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